EnhancerDB
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  3. rs115961686[chr1:27475060]
Enhancers that have rs115961686[chr1:27475060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115961686[chr1:27475060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27475052 27475060 NR4A2 JASPAR yes 27682209
chr1 27475053 27475061 CREB1 JASPAR yes 27682210
chr1 27475053 27475068 TFAP2A JASPAR yes 27682211
Genes associated with rs115961686[chr1:27475060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More