EnhancerDB
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  3. rs116006616[chr10:89912788]
Enhancers that have rs116006616[chr10:89912788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 89905225 89921155 enh28319
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
chr10 89912666 89913039 vista8218
VISTA
Transcript factors that have rs116006616[chr10:89912788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 89912324 89912974 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448381
chr10 89912324 89912974 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929864
chr10 89912371 89912875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448382
chr10 89912371 89912875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929865
chr10 89912374 89912951 POLR2A UCSC Txn Factor no Conserved 107929866
chr10 89912385 89912895 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448383
chr10 89912385 89912895 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929867
chr10 89912423 89912890 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448384
chr10 89912423 89912890 TFAP2C UCSC Txn Factor no Conserved 107929868
chr10 89912423 89912890 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929869
chr10 89912427 89912823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448385
chr10 89912427 89912823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929870
chr10 89912428 89912875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448386
chr10 89912428 89912875 TFAP2A UCSC Txn Factor no Conserved 107929871
chr10 89912428 89912875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929872
chr10 89912433 89912903 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21448387
chr10 89912433 89912903 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107929873
chr10 89912433 89912933 GATA3 UCSC Txn Factor no Conserved 107929874
chr10 89912441 89912824 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448388
chr10 89912441 89912824 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929875
chr10 89912454 89912870 MYC UCSC Txn Factor no Conserved 107929876
chr10 89912459 89912979 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929877
chr10 89912465 89913061 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929878
chr10 89912475 89912951 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448389
chr10 89912475 89912951 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929879
chr10 89912477 89912833 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21448390
chr10 89912477 89912833 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107929880
chr10 89912491 89913011 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929881
chr10 89912492 89912831 GATA2 UCSC Txn Factor no Conserved 107929882
chr10 89912492 89912848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448391
chr10 89912492 89912848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929883
chr10 89912513 89912873 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21448392
chr10 89912513 89912873 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107929884
chr10 89912531 89913041 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448395
chr10 89912531 89913041 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929887
chr10 89912534 89912910 EP300 UCSC Txn Factor no Conserved 107929888
chr10 89912534 89912938 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448396
chr10 89912534 89912938 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929889
chr10 89912535 89912865 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448397
chr10 89912535 89912865 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929890
chr10 89912543 89912799 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21448398
chr10 89912543 89912799 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107929891
chr10 89912550 89912826 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448399
chr10 89912550 89912826 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929892
chr10 89912554 89912930 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448400
chr10 89912554 89912930 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929893
chr10 89912562 89912932 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448401
chr10 89912562 89912932 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929894
chr10 89912574 89912914 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448402
chr10 89912574 89912914 JUN UCSC Txn Factor no Conserved 107929895
chr10 89912574 89912914 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929896
chr10 89912577 89912887 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21448403
chr10 89912577 89912887 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107929897
chr10 89912577 89912897 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448404
chr10 89912577 89912897 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929898
chr10 89912578 89912865 STAT3 UCSC Txn Factor no Conserved 107929899
chr10 89912579 89912835 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448405
chr10 89912579 89912835 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929900
chr10 89912579 89912850 FOS UCSC Txn Factor no Conserved 107929901
chr10 89912580 89912910 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448406
chr10 89912580 89912910 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929902
chr10 89912581 89912951 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929903
chr10 89912585 89912875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448407
chr10 89912585 89912875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929904
chr10 89912596 89912860 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448408
chr10 89912596 89912860 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929905
chr10 89912596 89912952 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929906
chr10 89912601 89912905 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448409
chr10 89912601 89912905 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929907
chr10 89912603 89912967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448410
chr10 89912603 89912967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929908
chr10 89912617 89912881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448411
chr10 89912617 89912881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929909
chr10 89912633 89912834 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448412
chr10 89912633 89912834 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929910
chr10 89912633 89912869 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929911
chr10 89912654 89912944 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929912
chr10 89912731 89912854 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21448413
chr10 89912731 89912854 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107929913
chr10 89912784 89912795 STAT3 JASPAR yes 21129085
chr10 89912784 89912795 STAT3 JASPAR yes 128926173
Genes associated with rs116006616[chr10:89912788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More