EnhancerDB
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  3. rs116007516[chr12:125008387]
Enhancers that have rs116007516[chr12:125008387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116007516[chr12:125008387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125007801 125008812 TCF7L2 GTRD no Colon (HCT116) 21580955
chr12 125007801 125008812 TCF7L2 GTRD no Colon (HCT116) 108068834
chr12 125008381 125008391 SP1 JASPAR yes 124388554
chr12 125008387 125008397 SP1 JASPAR yes 124388555
Genes associated with rs116007516[chr12:125008387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More