EnhancerDB
  1. Home
  2. SNP
  3. rs116015842[chr12:50964129]
Enhancers that have rs116015842[chr12:50964129]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50954380 50971535 enh2347
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116015842[chr12:50964129]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50964118 50964133 FOXA1 JASPAR yes 120845441
chr12 50964119 50964130 FOXB1 JASPAR yes 120845442
chr12 50964119 50964130 FOXC1 JASPAR yes 120845443
chr12 50964119 50964131 FOXC2 JASPAR yes 120845444
chr12 50964127 50964131 YY1 TRANSFAC yes 120845445
Genes associated with rs116015842[chr12:50964129], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More