EnhancerDB
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  3. rs116017828[chr1:151943367]
Enhancers that have rs116017828[chr1:151943367]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151932405 151955339 enh12260
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Kidney Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 151943125 151943453 vista3302
VISTA
Transcript factors that have rs116017828[chr1:151943367]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151942658 151943489 ZBTB33 GTRD no Brain (SK-N-SH) 107830142
chr1 151942768 151943432 ZBTB33 GTRD no Brain (SK-N-SH) 107830145
chr1 151942772 151943390 ZBTB33 GTRD no Brain (SK-N-SH) 107830146
chr1 151942816 151943426 ZBTB33 GTRD no Brain (SK-N-SH) 107830149
chr1 151943096 151943636 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107830151
chr1 151943166 151943476 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21338764
chr1 151943166 151943476 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107830152
Genes associated with rs116017828[chr1:151943367], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More