EnhancerDB
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  3. rs116030165[chr2:38937439]
Enhancers that have rs116030165[chr2:38937439]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116030165[chr2:38937439]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38937429 38937439 HOXA13 JASPAR yes 73168352
chr2 38937429 38937439 HOXB13 JASPAR yes 73168353
chr2 38937429 38937439 HOXD13 JASPAR yes 73168354
Genes associated with rs116030165[chr2:38937439], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More