EnhancerDB
  1. Home
  2. SNP
  3. rs116040615[chr12:52547152]
Enhancers that have rs116040615[chr12:52547152]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116040615[chr12:52547152]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52546652 52547312 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546513
chr12 52546864 52547248 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546514
chr12 52547133 52547153 RREB1 JASPAR yes 120922710
chr12 52547134 52547155 ZNF263 JASPAR yes 120922711
chr12 52547135 52547156 ZNF263 JASPAR yes 120922712
chr12 52547138 52547159 ZNF263 JASPAR yes 120922713
chr12 52547142 52547152 ZNF740 JASPAR yes 120922715
chr12 52547144 52547154 SP1 JASPAR yes 120922716
chr12 52547145 52547154 SP1 TRANSFAC yes 120922717
chr12 52547145 52547155 SP1 JASPAR yes 120922718
chr12 52547146 52547155 SP1 TRANSFAC yes 120922719
chr12 52547147 52547153 MAZ TRANSFAC yes 120922720
Genes associated with rs116040615[chr12:52547152], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More