EnhancerDB
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  3. rs116042187[chr4:7875854]
Enhancers that have rs116042187[chr4:7875854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 7872045 7899128 enh21351
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs116042187[chr4:7875854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 7875842 7875857 JUND JASPAR yes 88138278
chr4 7875843 7875856 JUN JASPAR yes 88138279
chr4 7875844 7875857 ATF4 JASPAR yes 88138280
chr4 7875844 7875858 ATF7 JASPAR yes 88138281
chr4 7875845 7875857 DBP JASPAR yes 88138282
chr4 7875845 7875857 HLF JASPAR yes 88138283
chr4 7875845 7875857 JDP2 JASPAR yes 88138284
chr4 7875845 7875857 TEF JASPAR yes 88138285
chr4 7875847 7875858 NFIL3 JASPAR yes 88138286
chr4 7875848 7875859 DMRT3 JASPAR yes 88138287
chr4 7875852 7875855 MYB TRANSFAC yes 88138288
chr4 7875854 7875860 SOX10 JASPAR yes 88138289
Genes associated with rs116042187[chr4:7875854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More