EnhancerDB
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  3. rs116048536[chr17:78734520]
Enhancers that have rs116048536[chr17:78734520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
chr17 78734428 78734929 vista26339
VISTA
Transcript factors that have rs116048536[chr17:78734520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 21797161
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 108307245
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 108307246
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 21797163
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 108307248
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 108307249
chr17 78734162 78741313 ZNF274 GTRD no Blood (GM12878) 21797164
chr17 78734162 78741313 ZNF274 GTRD no Blood (GM12878) 108307250
chr17 78734162 78741313 ZNF274 GTRD no Blood (GM12878) 108307251
chr17 78734331 78734607 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797165
chr17 78734331 78734607 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307252
chr17 78734351 78734575 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797166
chr17 78734351 78734575 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307253
chr17 78734356 78734686 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797167
chr17 78734356 78734686 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307254
chr17 78734386 78734696 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21797168
chr17 78734386 78734696 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108307255
chr17 78734409 78734669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797169
chr17 78734409 78734669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307256
chr17 78734430 78734541 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797170
chr17 78734430 78734541 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307257
chr17 78734455 78737927 ZNF274 GTRD no Blood (GM12878) 21797171
chr17 78734455 78737927 ZNF274 GTRD no Blood (GM12878) 108307258
chr17 78734455 78737927 ZNF274 GTRD no Blood (GM12878) 108307259
chr17 78734457 78735941 ZNF274 GTRD no Blood (GM12878) 21797172
chr17 78734457 78735941 ZNF274 GTRD no Blood (GM12878) 108307260
chr17 78734457 78735941 ZNF274 GTRD no Blood (GM12878) 108307261
chr17 78734461 78737796 ZNF274 GTRD no Blood (GM12878) 21797173
chr17 78734461 78737796 ZNF274 GTRD no Blood (GM12878) 108307262
chr17 78734461 78737796 ZNF274 GTRD no Blood (GM12878) 108307263
chr17 78734473 78737860 ZNF274 GTRD no Blood (GM12878) 21797174
chr17 78734473 78737860 ZNF274 GTRD no Blood (GM12878) 108307264
chr17 78734473 78737860 ZNF274 GTRD no Blood (GM12878) 108307265
chr17 78734488 78740118 ZNF274 GTRD no Blood (GM12878) 21797175
chr17 78734488 78740118 ZNF274 GTRD no Blood (GM12878) 108307266
chr17 78734488 78740118 ZNF274 GTRD no Blood (GM12878) 108307267
chr17 78734512 78737727 ZNF274 GTRD no Blood (GM12878) 21797176
chr17 78734512 78737727 ZNF274 GTRD no Blood (GM12878) 108307268
chr17 78734512 78737727 ZNF274 GTRD no Blood (GM12878) 108307269
chr17 78734519 78734789 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21797177
chr17 78734519 78734789 FOXA1 UCSC Txn Factor no Conserved 108307270
chr17 78734519 78734789 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108307271
Genes associated with rs116048536[chr17:78734520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More