EnhancerDB
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  3. rs116056963[chr1:235246340]
Enhancers that have rs116056963[chr1:235246340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235240345 235251255 enh12800
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116056963[chr1:235246340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235245456 235246821 ZNF274 GTRD no Blood (GM12878) 107885827
chr1 235245724 235246754 ZNF274 GTRD no Blood (GM12878) 107885828
chr1 235245758 235246985 ZNF274 GTRD no Blood (GM12878) 107885829
chr1 235245779 235247051 ZNF274 GTRD no Bone Marrow (K562) 107885830
chr1 235245791 235246968 ZNF274 GTRD no Blood (GM12878) 107885831
chr1 235245801 235246927 ZNF274 GTRD no Bone Marrow (K562) 107885832
chr1 235245833 235246652 ZNF274 GTRD no Blood (GM12878) 107885833
chr1 235245849 235246560 ZNF274 GTRD no Blood (GM12878) 107885834
chr1 235245892 235246559 ZNF274 GTRD no Blood (GM12878) 107885835
chr1 235245941 235247075 ZBTB33 GTRD no Brain (SK-N-SH) 107885836
chr1 235246021 235247163 ZNF143 GTRD no Epithelial (MCF-7) 21403556
chr1 235246021 235247163 ZNF143 GTRD no Epithelial (MCF-7) 107885837
chr1 235246063 235247306 ZNF143 GTRD no Epithelial (MCF-7) 21403557
chr1 235246063 235247306 ZNF143 GTRD no Epithelial (MCF-7) 107885838
chr1 235246101 235247243 ZNF143 GTRD no Epithelial (MCF-7) 21403558
chr1 235246101 235247243 ZNF143 GTRD no Epithelial (MCF-7) 107885839
chr1 235246129 235247248 ZNF143 GTRD no Epithelial (MCF-7) 21403559
chr1 235246129 235247248 ZNF143 GTRD no Epithelial (MCF-7) 107885840
chr1 235246232 235247084 ZNF143 GTRD no Epithelial (MCF-7) 21403560
chr1 235246232 235247084 ZNF143 GTRD no Epithelial (MCF-7) 107885841
chr1 235246236 235247025 ZNF143 GTRD no Epithelial (MCF-7) 21403561
chr1 235246236 235247025 ZNF143 GTRD no Epithelial (MCF-7) 107885842
chr1 235246311 235247077 ZNF143 GTRD no Epithelial (MCF-7) 21403562
chr1 235246311 235247077 ZNF143 GTRD no Epithelial (MCF-7) 107885843
Genes associated with rs116056963[chr1:235246340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More