EnhancerDB
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  3. rs116073848[chr5:154156473]
Enhancers that have rs116073848[chr5:154156473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 154145125 154165844 enh8815
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116073848[chr5:154156473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 154156465 154156481 SOX4 JASPAR yes 67057566
chr5 154156466 154156481 SOX21 JASPAR yes 67057567
chr5 154156471 154156481 NKX2-3 JASPAR yes 67057568
chr5 154156472 154156480 ISL2 JASPAR yes 67057569
chr5 154156472 154156481 NKX3-2 JASPAR yes 67057570
Genes associated with rs116073848[chr5:154156473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More