EnhancerDB
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  3. rs116078000[chr1:225955434]
Enhancers that have rs116078000[chr1:225955434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 225954390 225955885 vista141
VISTA
Transcript factors that have rs116078000[chr1:225955434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225955220 225955844 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385833
chr1 225955304 225955848 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385834
chr1 225955361 225955661 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385835
chr1 225955386 225955722 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385836
chr1 225955397 225955787 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385837
chr1 225955400 225955790 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385838
chr1 225955421 225955761 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385839
chr1 225955427 225955943 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385840
Genes associated with rs116078000[chr1:225955434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More