EnhancerDB
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  3. rs116088828[chr3:133175460]
Enhancers that have rs116088828[chr3:133175460]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 133154565 133175895 enh7549
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs116088828[chr3:133175460]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 133175454 133175466 HES5 JASPAR yes 5828855
chr3 133175454 133175466 HES7 JASPAR yes 5828856
chr3 133175454 133175466 PKNOX1 JASPAR yes 5828857
chr3 133175454 133175466 PKNOX2 JASPAR yes 5828858
chr3 133175454 133175466 TGIF1 JASPAR yes 5828859
chr3 133175454 133175466 TGIF2 JASPAR yes 5828860
chr3 133175455 133175466 USF2 JASPAR yes 5828861
chr3 133175456 133175466 MAX JASPAR yes 5828862
Genes associated with rs116088828[chr3:133175460], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More