EnhancerDB
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  3. rs116089109[chr2:218269202]
Enhancers that have rs116089109[chr2:218269202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 218255705 218270575 enh34264
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Lung (A549) Stomach Thyroid Lung (PC-9) Breast Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs116089109[chr2:218269202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 218269194 218269210 SRF JASPAR yes 80936670
chr2 218269200 218269204 TEAD2 TRANSFAC yes 80936671
chr2 218269202 218269209 NKX3-1 JASPAR yes 80936672
Genes associated with rs116089109[chr2:218269202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More