EnhancerDB
  1. Home
  2. SNP
  3. rs116097929[chr17:62957809]
Enhancers that have rs116097929[chr17:62957809]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116097929[chr17:62957809]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62952883 62958112 ZNF143 GTRD no Epithelial (MCF-7) 21779990
chr17 62954118 62958130 ZNF143 GTRD no Epithelial (MCF-7) 21779997
chr17 62957288 62957832 ZNF143 GTRD no Epithelial (MCF-7) 21780032
chr17 62957290 62958043 ZNF143 GTRD no Epithelial (MCF-7) 21780033
chr17 62957329 62957813 ZNF143 GTRD no Epithelial (MCF-7) 21780034
chr17 62957348 62957821 ZNF143 GTRD no Epithelial (MCF-7) 21780035
chr17 62957720 62958076 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780036
chr17 62957799 62957812 TFAP2A JASPAR yes 55331646
chr17 62957799 62957812 TFAP2B JASPAR yes 55331647
chr17 62957799 62957812 TFAP2C JASPAR yes 55331648
chr17 62957799 62957814 TFAP2C JASPAR yes 55331649
chr17 62957800 62957811 EBF1 JASPAR yes 55331650
chr17 62957804 62957819 NR2C2 JASPAR yes 55331651
chr17 62957805 62957819 RXRB JASPAR yes 55331652
chr17 62957805 62957819 RXRG JASPAR yes 55331653
chr17 62957807 62957811 LFA1 TRANSFAC yes 55331654
Genes associated with rs116097929[chr17:62957809], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More