EnhancerDB
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  3. rs11609965[chr12:125032946]
Enhancers that have rs11609965[chr12:125032946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11609965[chr12:125032946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 21581013
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 108068905
chr12 125032378 125033631 ZNF143 GTRD no Epithelial (MCF-7) 21581014
chr12 125032378 125033631 ZNF143 GTRD no Epithelial (MCF-7) 108068906
chr12 125032929 125033434 SOX2 GTRD no Neural Stem Cells (H9) 108068907
chr12 125032945 125032964 PAX5 JASPAR yes 124392486
Genes associated with rs11609965[chr12:125032946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More