EnhancerDB
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  3. rs1161084[chr12:67828886]
Enhancers that have rs1161084[chr12:67828886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 67817305 67832355 enh2418
Prostate (PC-3) Liver (HepG2) Kidney Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr12 67828762 67829103 vista13881
VISTA
Transcript factors that have rs1161084[chr12:67828886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 67827746 67828917 ZBTB33 GTRD no Brain (SK-N-SH) 108042909
chr12 67828536 67829032 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21553732
chr12 67828536 67829032 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108042910
chr12 67828703 67828959 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108042911
chr12 67828741 67829151 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108042912
chr12 67828872 67828887 NR2C2 JASPAR yes 82426948
chr12 67828872 67828887 NR2C2 JASPAR yes 121584314
chr12 67828881 67828896 MEF2C JASPAR yes 82426953
chr12 67828881 67828896 MEF2C JASPAR yes 121584319
chr12 67828882 67828894 MEF2B JASPAR yes 82426954
chr12 67828882 67828894 MEF2D JASPAR yes 82426955
chr12 67828882 67828894 MEF2B JASPAR yes 121584320
chr12 67828882 67828894 MEF2D JASPAR yes 121584321
chr12 67828884 67828888 YY1 TRANSFAC yes 82426956
chr12 67828884 67828888 YY1 TRANSFAC yes 121584322
Genes associated with rs1161084[chr12:67828886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More