EnhancerDB
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  3. rs116135627[chr1:203635976]
Enhancers that have rs116135627[chr1:203635976]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203628785 203657695 enh12563
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116135627[chr1:203635976]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203635957 203635978 REST JASPAR yes 34653259
chr1 203635958 203635977 REST JASPAR yes 34653260
chr1 203635967 203635986 RFX2 JASPAR yes 34653264
chr1 203635975 203635991 RFX2 JASPAR yes 34653265
chr1 203635975 203635991 RFX3 JASPAR yes 34653266
chr1 203635975 203635991 RFX4 JASPAR yes 34653267
chr1 203635975 203635991 RFX5 JASPAR yes 34653268
chr1 203635976 203635995 RFX2 JASPAR yes 34653269
Genes associated with rs116135627[chr1:203635976], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More