EnhancerDB
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  3. rs116138407[chr12:58227684]
Enhancers that have rs116138407[chr12:58227684]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58223192 58238686 enh14761
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116138407[chr12:58227684]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58227676 58227694 RARA JASPAR yes 121141017
chr12 58227677 58227692 JUND JASPAR yes 121141018
chr12 58227678 58227691 JUN JASPAR yes 121141019
chr12 58227679 58227686 JUN TRANSFAC yes 121141020
Genes associated with rs116138407[chr12:58227684], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More