EnhancerDB
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  3. rs116142028[chr1:205245869]
Enhancers that have rs116142028[chr1:205245869]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs116142028[chr1:205245869]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205245866 205245878 TFAP2A JASPAR yes 34750160
chr1 205245866 205245878 TFAP2B JASPAR yes 34750161
chr1 205245866 205245878 TFAP2C JASPAR yes 34750162
Genes associated with rs116142028[chr1:205245869], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More