EnhancerDB
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  3. rs116150601[chr17:43443964]
Enhancers that have rs116150601[chr17:43443964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43440002 43455235 enh17189
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs116150601[chr17:43443964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43443631 43445284 P63 GTRD no Skin (Keratinocyte) 21765509
chr17 43443665 43444901 P63 GTRD no Skin (Keratinocyte) 21765510
chr17 43443808 43444917 P63 GTRD no Skin (Keratinocyte) 21765511
chr17 43443839 43444910 P63 GTRD no Skin (Keratinocyte) 21765512
chr17 43443849 43445674 ZNF274 GTRD no Cervix (HeLa-S3) 21765513
chr17 43443878 43444342 SOX2 GTRD no Neural Stem Cells (H9) 21765514
chr17 43443912 43444281 SOX2 GTRD no Neural Stem Cells (H9) 21765515
chr17 43443940 43444399 SOX2 GTRD no Neural Stem Cells (H9) 21765516
chr17 43443947 43443968 IRF1 JASPAR yes 54449007
chr17 43443949 43443964 IRF9 JASPAR yes 54449009
chr17 43443951 43443965 SPIC JASPAR yes 54449011
chr17 43443951 43443965 STAT1 JASPAR yes 54449012
chr17 43443951 43443966 STAT2 JASPAR yes 54449013
chr17 43443959 43443969 TBX21 JASPAR yes 54449014
chr17 43443959 43443970 TBX20 JASPAR yes 54449015
chr17 43443959 43443970 TBX2 JASPAR yes 54449016
chr17 43443959 43443972 EOMES JASPAR yes 54449017
chr17 43443960 43443968 MGA JASPAR yes 54449018
chr17 43443960 43443968 TBX15 JASPAR yes 54449019
chr17 43443960 43443968 TBX1 JASPAR yes 54449020
chr17 43443960 43443968 TBX4 JASPAR yes 54449021
chr17 43443960 43443968 TBX5 JASPAR yes 54449022
chr17 43443960 43443970 TBR1 JASPAR yes 54449023
Genes associated with rs116150601[chr17:43443964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More