EnhancerDB
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  3. rs116163297[chr17:62960160]
Enhancers that have rs116163297[chr17:62960160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116163297[chr17:62960160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62960011 62960201 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780060
chr17 62960113 62960621 ZBTB33 GTRD no Lung (A549) 21780061
chr17 62960152 62960166 SPIC JASPAR yes 55332026
Genes associated with rs116163297[chr17:62960160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More