EnhancerDB
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  3. rs116180426[chr2:228270558]
Enhancers that have rs116180426[chr2:228270558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116180426[chr2:228270558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228270550 228270570 RREB1 JASPAR yes 81519645
chr2 228270552 228270562 GCM2 JASPAR yes 81519646
chr2 228270553 228270573 RREB1 JASPAR yes 81519647
chr2 228270554 228270569 RUNX2 JASPAR yes 81519648
chr2 228270556 228270576 RREB1 JASPAR yes 81519649
Genes associated with rs116180426[chr2:228270558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More