EnhancerDB
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  3. rs116188597[chr1:227004130]
Enhancers that have rs116188597[chr1:227004130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116188597[chr1:227004130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227004112 227004133 IRF1 JASPAR yes 35847533
chr1 227004116 227004130 SPI1 JASPAR yes 35847534
chr1 227004116 227004131 STAT2 JASPAR yes 35847535
Genes associated with rs116188597[chr1:227004130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More