EnhancerDB
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  3. rs116190486[chr17:25801624]
Enhancers that have rs116190486[chr17:25801624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116190486[chr17:25801624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25799751 25801696 POLR2A UCSC Txn Factor no Conserved 108245510
chr17 25800971 25801778 GATA1 UCSC Txn Factor no Conserved 108245554
chr17 25801615 25801626 NFE2 JASPAR yes 53634012
chr17 25801624 25801631 NFATC2 JASPAR yes 53634013
Genes associated with rs116190486[chr17:25801624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More