EnhancerDB
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  3. rs116196852[chr16:89449999]
Enhancers that have rs116196852[chr16:89449999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116196852[chr16:89449999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89449584 89450108 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21738408
chr16 89449584 89450108 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108225873
chr16 89449641 89450374 TCF7L2 GTRD no Colon (HCT116) 21738410
chr16 89449641 89450374 TCF7L2 GTRD no Colon (HCT116) 108225875
Genes associated with rs116196852[chr16:89449999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More