EnhancerDB
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  3. rs116212439[chr1:208412850]
Enhancers that have rs116212439[chr1:208412850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208372373 208415646 enh12613
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116212439[chr1:208412850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208412650 208412926 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374956
chr1 208412650 208412926 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107865552
chr1 208412841 208412860 CTCF JASPAR yes 34910961
chr1 208412844 208412850 ZNF354C JASPAR yes 34910962
chr1 208412845 208412855 FIGLA JASPAR yes 34910963
chr1 208412845 208412855 TCF3 JASPAR yes 34910964
chr1 208412846 208412855 SNAI2 JASPAR yes 34910965
chr1 208412847 208412852 USF2 TRANSFAC yes 34910966
Genes associated with rs116212439[chr1:208412850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More