EnhancerDB
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  3. rs116214930[chr1:153484073]
Enhancers that have rs116214930[chr1:153484073]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116214930[chr1:153484073]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153483403 153484086 ZNF143 GTRD no Epithelial (MCF-7) 21339480
chr1 153483411 153484216 ZNF143 GTRD no Epithelial (MCF-7) 21339481
chr1 153483480 153484242 ZNF143 GTRD no Epithelial (MCF-7) 21339506
chr1 153483514 153484167 ZNF143 GTRD no Epithelial (MCF-7) 21339513
chr1 153483615 153484140 ZNF143 GTRD no Epithelial (MCF-7) 21339516
chr1 153483631 153484149 ZNF143 GTRD no Epithelial (MCF-7) 21339517
chr1 153483718 153484215 TCF7L2 GTRD no Colon (HCT116) 21339519
chr1 153483755 153484110 ZNF143 GTRD no Epithelial (MCF-7) 21339520
chr1 153484053 153484073 RREB1 JASPAR yes 32255007
chr1 153484054 153484074 RREB1 JASPAR yes 32255008
chr1 153484058 153484078 RREB1 JASPAR yes 32255011
chr1 153484060 153484075 FOXA1 JASPAR yes 32255012
chr1 153484061 153484073 FOXI1 JASPAR yes 32255014
chr1 153484061 153484076 FOXP1 JASPAR yes 32255015
chr1 153484062 153484074 FOXC2 JASPAR yes 32255016
chr1 153484063 153484083 RREB1 JASPAR yes 32255017
chr1 153484064 153484075 FOXA1 JASPAR yes 32255018
chr1 153484065 153484080 FOXP1 JASPAR yes 32255019
chr1 153484068 153484088 RREB1 JASPAR yes 32255020
chr1 153484073 153484093 RREB1 JASPAR yes 32255021
Genes associated with rs116214930[chr1:153484073], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More