EnhancerDB
  1. Home
  2. SNP
  3. rs116219720[chr12:52675461]
Enhancers that have rs116219720[chr12:52675461]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52669305 52679150 enh14728
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs116219720[chr12:52675461]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033834
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033835
chr12 52674312 52675566 ZNF274 GTRD no Bone Marrow (K562) 21546938
chr12 52674312 52675566 ZNF274 GTRD no Bone Marrow (K562) 108033912
chr12 52674312 52675566 ZNF274 GTRD no Bone Marrow (K562) 108033913
chr12 52675446 52675465 REST JASPAR yes 120934420
chr12 52675459 52675480 ZNF263 JASPAR yes 120934422
Genes associated with rs116219720[chr12:52675461], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More