EnhancerDB
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  3. rs116220277[chr1:94239370]
Enhancers that have rs116220277[chr1:94239370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94213125 94252475 enh499
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116220277[chr1:94239370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94239365 94239380 MEF2C JASPAR yes 30834550
chr1 94239366 94239381 MEF2A JASPAR yes 30834551
chr1 94239367 94239379 MEF2A JASPAR yes 30834552
chr1 94239367 94239379 MEF2B JASPAR yes 30834553
chr1 94239367 94239379 MEF2D JASPAR yes 30834554
chr1 94239368 94239378 MEF2A JASPAR yes 30834555
chr1 94239369 94239384 FOXP1 JASPAR yes 30834556
Genes associated with rs116220277[chr1:94239370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More