EnhancerDB
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  3. rs116241777[chr1:185614215]
Enhancers that have rs116241777[chr1:185614215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116241777[chr1:185614215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185614181 185614631 ZNF143 GTRD no Epithelial (MCF-7) 21359408
chr1 185614207 185614221 SPI1 JASPAR yes 33829914
chr1 185614207 185614221 SPIC JASPAR yes 33829915
chr1 185614210 185614225 NR2C2 JASPAR yes 33829916
chr1 185614211 185614225 PLAG1 JASPAR yes 33829917
Genes associated with rs116241777[chr1:185614215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More