EnhancerDB
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  3. rs116247988[chr1:3246377]
Enhancers that have rs116247988[chr1:3246377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 3244561 3248729 vista2
VISTA
Transcript factors that have rs116247988[chr1:3246377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3246364 3246383 CTCF JASPAR yes 26280752
chr1 3246364 3246383 CTCF JASPAR yes 71117713
chr1 3246367 3246381 ZIC1 JASPAR yes 26280753
chr1 3246367 3246381 ZIC1 JASPAR yes 71117714
chr1 3246367 3246382 ZIC4 JASPAR yes 26280754
chr1 3246367 3246382 ZIC4 JASPAR yes 71117715
Genes associated with rs116247988[chr1:3246377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More