EnhancerDB
  1. Home
  2. SNP
  3. rs116256223[chr1:204053463]
Enhancers that have rs116256223[chr1:204053463]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116256223[chr1:204053463]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204053349 204053959 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370108
chr1 204053349 204053959 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859574
chr1 204053365 204053835 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107859575
chr1 204053378 204053978 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370109
chr1 204053378 204053978 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859576
chr1 204053396 204053916 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370110
chr1 204053396 204053916 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859577
chr1 204053444 204053934 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370111
chr1 204053444 204053934 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859578
chr1 204053450 204053465 ZIC3 JASPAR yes 34677588
chr1 204053450 204053465 ZIC4 JASPAR yes 34677589
chr1 204053451 204053465 GLIS2 JASPAR yes 34677590
chr1 204053451 204053465 GLIS3 JASPAR yes 34677591
chr1 204053451 204053465 ZIC1 JASPAR yes 34677592
chr1 204053455 204053465 ZNF740 JASPAR yes 34677593
Genes associated with rs116256223[chr1:204053463], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More