EnhancerDB
  1. Home
  2. SNP
  3. rs116258568[chr1:41420411]
Enhancers that have rs116258568[chr1:41420411]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41400705 41424275 enh11780
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Placenta Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Stomach
Transcript factors that have rs116258568[chr1:41420411]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41420410 41420424 ONECUT1 JASPAR yes 28359488
chr1 41420410 41420424 ONECUT2 JASPAR yes 28359489
chr1 41420411 41420421 CUX1 JASPAR yes 28359490
chr1 41420411 41420421 CUX2 JASPAR yes 28359491
chr1 41420411 41420421 PAX3 JASPAR yes 28359492
chr1 41420411 41420421 PAX7 JASPAR yes 28359493
Genes associated with rs116258568[chr1:41420411], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More