EnhancerDB
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  3. rs116269197[chr17:59390722]
Enhancers that have rs116269197[chr17:59390722]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116269197[chr17:59390722]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59390667 59391283 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21777315
chr17 59390667 59391283 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108279387
chr17 59390715 59390726 RUNX1 JASPAR yes 55146928
Genes associated with rs116269197[chr17:59390722], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More