EnhancerDB
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  3. rs116282380[chr1:27840662]
Enhancers that have rs116282380[chr1:27840662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27840205 27858326 enh176
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116282380[chr1:27840662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27840658 27840670 NHLH1 JASPAR yes 27703522
chr1 27840658 27840671 ZBTB18 JASPAR yes 27703523
chr1 27840659 27840669 NHLH1 JASPAR yes 27703524
Genes associated with rs116282380[chr1:27840662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More