EnhancerDB
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  3. rs116287427[chr12:46868035]
Enhancers that have rs116287427[chr12:46868035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116287427[chr12:46868035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46867481 46868072 TFAP2A UCSC Txn Factor no Conserved 108027431
chr12 46867542 46868072 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541910
chr12 46867542 46868072 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027455
chr12 46867626 46868036 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541914
chr12 46867626 46868036 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108027460
chr12 46868030 46868045 JUND JASPAR yes 120626177
chr12 46868033 46868045 JDP2 JASPAR yes 120626178
chr12 46868033 46868048 JUND JASPAR yes 120626179
Genes associated with rs116287427[chr12:46868035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More