EnhancerDB
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  3. rs116289978[chr1:27924117]
Enhancers that have rs116289978[chr1:27924117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs116289978[chr1:27924117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27924071 27924441 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802598
chr1 27924103 27924124 ZNF263 JASPAR yes 27714353
chr1 27924106 27924127 ZNF263 JASPAR yes 27714354
chr1 27924108 27924129 IRF1 JASPAR yes 27714355
chr1 27924109 27924130 ZNF263 JASPAR yes 27714356
Genes associated with rs116289978[chr1:27924117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More