EnhancerDB
  1. Home
  2. SNP
  3. rs116307473[chr1:7608660]
Enhancers that have rs116307473[chr1:7608660]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7605943 7624475 enh41
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs116307473[chr1:7608660]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7608609 7609401 SOX2 GTRD no Neural Stem Cells (H9) 107801932
chr1 7608648 7608661 TFAP2A JASPAR yes 26475415
chr1 7608648 7608661 TFAP2B JASPAR yes 26475416
chr1 7608648 7608661 TFAP2C JASPAR yes 26475417
chr1 7608659 7608679 TP53 JASPAR yes 26475418
Genes associated with rs116307473[chr1:7608660], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More