EnhancerDB
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  3. rs116317577[chr5:78058426]
Enhancers that have rs116317577[chr5:78058426]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116317577[chr5:78058426]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78058417 78058432 LEF1 JASPAR yes 63623222
chr5 78058421 78058427 LEF1 TRANSFAC yes 63623223
chr5 78058421 78058427 TCF4 TRANSFAC yes 63623224
Genes associated with rs116317577[chr5:78058426], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More