EnhancerDB
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  3. rs116317601[chr1:27895961]
Enhancers that have rs116317601[chr1:27895961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs116317601[chr1:27895961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27895957 27895977 RREB1 JASPAR yes 27710357
chr1 27895960 27895971 TBX20 JASPAR yes 27710358
chr1 27895961 27895971 SREBF1 JASPAR yes 27710359
chr1 27895961 27895971 SREBF2 JASPAR yes 27710360
Genes associated with rs116317601[chr1:27895961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More