EnhancerDB
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  3. rs116319927[chr17:65430210]
Enhancers that have rs116319927[chr17:65430210]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116319927[chr17:65430210]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65430204 65430219 RUNX2 JASPAR yes 55503376
chr17 65430208 65430218 RUNX3 JASPAR yes 55503377
chr17 65430208 65430472 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782222
chr17 65430208 65430472 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285851
chr17 65430209 65430218 RUNX2 JASPAR yes 55503378
Genes associated with rs116319927[chr17:65430210], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More