EnhancerDB
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  3. rs116330534[chr1:224386132]
Enhancers that have rs116330534[chr1:224386132]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116330534[chr1:224386132]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224385868 224386702 TEF1 GTRD no Bone (Osteoblast) 21384195
chr1 224385916 224386528 ZNF274 GTRD no Bone Marrow (K562) 21384196
chr1 224386022 224386582 ZNF274 GTRD no Cervix (HeLa-S3) 21384197
chr1 224386114 224386133 CTCF JASPAR yes 35692706
chr1 224386132 224386147 TFAP2C JASPAR yes 35692714
Genes associated with rs116330534[chr1:224386132], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More