EnhancerDB
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  3. rs116330860[chr15:39495616]
Enhancers that have rs116330860[chr15:39495616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39472205 39509375 enh16053
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Placenta Colon (HCT116) Uterus Thyroid Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116330860[chr15:39495616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39495313 39495762 ZNF143 GTRD no Epithelial (MCF-7) 21648247
chr15 39495520 39496595 P63 GTRD no Skin (Keratinocyte) 21648248
chr15 39495578 39496355 P63 GTRD no Skin (Keratinocyte) 21648249
chr15 39495594 39496351 P63 GTRD no Skin (Keratinocyte) 21648250
chr15 39495610 39495624 POU4F1 JASPAR yes 22864090
chr15 39495610 39495626 POU4F3 JASPAR yes 22864091
chr15 39495611 39495627 POU4F2 JASPAR yes 22864092
chr15 39495611 39495627 POU4F3 JASPAR yes 22864093
chr15 39495611 39496564 P63 GTRD no Skin (Keratinocyte) 21648251
chr15 39495613 39495617 YY1 TRANSFAC yes 22864094
chr15 39495613 39495627 POU4F1 JASPAR yes 22864095
chr15 39495614 39495624 POU6F1 JASPAR yes 22864096
chr15 39495615 39495623 LMX1A JASPAR yes 22864097
chr15 39495615 39495623 LMX1B JASPAR yes 22864098
chr15 39495615 39495623 NKX6-1 JASPAR yes 22864099
chr15 39495615 39495623 NKX6-2 JASPAR yes 22864100
chr15 39495615 39495623 VAX1 JASPAR yes 22864101
chr15 39495615 39495623 VAX2 JASPAR yes 22864102
chr15 39495615 39495623 VSX1 JASPAR yes 22864103
chr15 39495615 39495623 VSX2 JASPAR yes 22864104
Genes associated with rs116330860[chr15:39495616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More