EnhancerDB
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  3. rs116335477[chr1:52104270]
Enhancers that have rs116335477[chr1:52104270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116335477[chr1:52104270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52104261 52104277 ZNF143 JASPAR yes 28857637
chr1 52104261 52104279 ESR2 JASPAR yes 28857638
chr1 52104262 52104272 SP1 JASPAR yes 28857639
chr1 52104262 52104277 ESR2 JASPAR yes 28857640
chr1 52104262 52104282 ESR1 JASPAR yes 28857641
chr1 52104268 52104279 FOSL2 JASPAR yes 28857643
Genes associated with rs116335477[chr1:52104270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More