EnhancerDB
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  3. rs116348876[chr1:25042903]
Enhancers that have rs116348876[chr1:25042903]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116348876[chr1:25042903]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25042899 25042913 ONECUT3 JASPAR yes 27522320
chr1 25042900 25042909 SOX9 JASPAR yes 27522321
chr1 25042901 25042916 FOXP1 JASPAR yes 27522322
chr1 25042901 25042922 IRF1 JASPAR yes 27522323
chr1 25042902 25042911 SRY JASPAR yes 27522324
chr1 25042903 25042918 FOXP1 JASPAR yes 27522325
chr1 25042903 25042924 IRF1 JASPAR yes 27522326
Genes associated with rs116348876[chr1:25042903], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More