EnhancerDB
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  3. rs116361712[chr1:235004171]
Enhancers that have rs116361712[chr1:235004171]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116361712[chr1:235004171]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235003374 235005642 ZNF274 GTRD no Blood (GM12878) 21399290
chr1 235003432 235016952 ZNF274 GTRD no Blood (GM12878) 21399291
chr1 235003432 235016952 ZNF274 GTRD no Blood (GM12878) 107883393
chr1 235003432 235016952 ZNF274 GTRD no Blood (GM12878) 107883394
chr1 235003432 235016952 ZNF274 GTRD no Blood (GM12878) 107883395
chr1 235003617 235007533 ZNF274 GTRD no Blood (GM12878) 21399292
chr1 235003847 235005523 ZNF274 GTRD no Blood (GM12878) 21399293
chr1 235003948 235005510 ZNF274 GTRD no Blood (GM12878) 21399294
chr1 235004016 235005549 ZNF274 GTRD no Blood (GM12878) 21399295
chr1 235004156 235004171 HNF4A JASPAR yes 36323193
chr1 235004161 235004174 NR2F1 JASPAR yes 36323194
chr1 235004163 235004171 NR4A2 JASPAR yes 36323195
chr1 235004164 235004179 ESR2 JASPAR yes 36323196
Genes associated with rs116361712[chr1:235004171], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More