EnhancerDB
  1. Home
  2. SNP
  3. rs116364741[chr16:85589398]
Enhancers that have rs116364741[chr16:85589398]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116364741[chr16:85589398]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85586601 85591170 POLR2A UCSC Txn Factor no Conserved 108215987
chr16 85586601 85591170 POLR2A UCSC Txn Factor no Conserved 108215988
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 21728824
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 108216104
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 108216105
chr16 85587373 85589674 ZNF274 GTRD no Bone Marrow (K562) 21728843
chr16 85587390 85589479 TCF7L2 GTRD no Colon (HCT116) 21728845
chr16 85587462 85591088 ZNF274 GTRD no Bone Marrow (K562) 21728847
chr16 85588349 85590205 ZNF274 GTRD no Bone Marrow (K562) 21728934
chr16 85588568 85589632 TCF7L2 GTRD no Colon (HCT116) 21728943
chr16 85588599 85589603 ZNF143 GTRD no Epithelial (MCF-7) 21728948
chr16 85588599 85589660 TCF7L2 GTRD no Colon (HCT116) 21728949
chr16 85588633 85589559 TCF7L2 GTRD no Colon (HCT116) 21728952
chr16 85588651 85589803 ZNF274 GTRD no Bone Marrow (K562) 21728956
chr16 85588746 85589470 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728969
chr16 85588887 85589551 TCF7L2 GTRD no Colon (HCT116) 21729001
chr16 85588961 85589481 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21729008
chr16 85588985 85589586 TCF7L2 GTRD no Colon (HCT116) 21729009
chr16 85589019 85589635 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21729010
chr16 85589161 85589537 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729011
chr16 85589172 85589639 ZNF274 GTRD no Bone Marrow (K562) 21729012
chr16 85589177 85589687 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729013
chr16 85589204 85589408 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729014
chr16 85589207 85591412 ZNF274 GTRD no Blood (GM12878) 108216124
chr16 85589346 85589610 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21729015
chr16 85589355 85591118 ZNF274 GTRD no Cervix (HeLa-S3) 21729016
chr16 85589359 85594161 ZNF274 GTRD no Bone Marrow (K562) 21729017
chr16 85589359 85594161 ZNF274 GTRD no Bone Marrow (K562) 108216125
chr16 85589376 85589746 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729018
chr16 85589396 85589410 GLIS3 JASPAR yes 12076228
chr16 85589396 85589786 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729019
chr16 85589397 85589409 INSM1 JASPAR yes 12076229
Genes associated with rs116364741[chr16:85589398], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More