EnhancerDB
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  3. rs116374150[chr1:2176561]
Enhancers that have rs116374150[chr1:2176561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116374150[chr1:2176561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2175546 2181036 ZNF274 GTRD no Bone Marrow (K562) 107801815
chr1 2176541 2176561 RREB1 JASPAR yes 26226253
chr1 2176544 2176564 RREB1 JASPAR yes 26226254
chr1 2176545 2176565 RREB1 JASPAR yes 26226255
chr1 2176546 2176566 RREB1 JASPAR yes 26226256
chr1 2176553 2176568 ZIC3 JASPAR yes 26226257
chr1 2176560 2176581 IRF1 JASPAR yes 26226258
Genes associated with rs116374150[chr1:2176561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More