EnhancerDB
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  3. rs116384932[chr17:78753546]
Enhancers that have rs116384932[chr17:78753546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs116384932[chr17:78753546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78753348 78754356 ZNF274 GTRD no Blood (GM12878) 21797286
chr17 78753348 78754356 ZNF274 GTRD no Blood (GM12878) 108307531
chr17 78753482 78754548 ZNF274 GTRD no Blood (GM12878) 21797287
chr17 78753482 78754548 ZNF274 GTRD no Blood (GM12878) 108307532
chr17 78753519 78754174 ZNF274 GTRD no Liver (HepG2) 108307533
chr17 78753535 78754338 ZNF274 GTRD no Blood (GM12878) 21797288
chr17 78753535 78754338 ZNF274 GTRD no Blood (GM12878) 108307534
chr17 78753536 78753555 REST JASPAR yes 56278353
chr17 78753537 78754308 ZNF274 GTRD no Blood (GM12878) 21797289
chr17 78753537 78754308 ZNF274 GTRD no Blood (GM12878) 108307535
chr17 78753541 78753551 NFIA JASPAR yes 56278354
chr17 78753543 78753549 NFIC JASPAR yes 56278355
Genes associated with rs116384932[chr17:78753546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More